The detailed information of tRNA gene sequence


Sequence ID>WENV170979813
Genome IDMTKZ01108589
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1157
End posion on genome 1081
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nngcagccgc
tRNA gene sequence 
GGGGGCGTAGCTCAGCTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCGAG
TCCCGTCGCTCCCGCCA
Downstream region at tRNA end position 
tgaccctcct
Secondary structure (Cloverleaf model)
>WENV170979813	Asp	GTC
                   c      GCCA tgaccctcct
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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