The detailed information of tRNA gene sequence


Sequence ID>WENV170979824
Genome IDMTKZ01109580
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1144
End posion on genome 1219
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtccccgtgt
tRNA gene sequence 
GGGCCCATAGCTCAGTGGTTAGAGCTGCCGACTCATAATCGGCCGGTCGTAGGTTCGAAT
CCTACTGGGCCCACCA
Downstream region at tRNA end position 
aaacccccgc
Secondary structure (Cloverleaf model)
>WENV170979824	Met	CAT
                   t      ACCA aaacccccgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C A T C C     A
      T G A        A      | | | | |     G
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     CGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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