The detailed information of tRNA gene sequence


Sequence ID>WENV170979829
Genome IDMTKZ01109859
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 397
End posion on genome 484
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gattgccgtc
tRNA gene sequence 
GGAGGGCTGGCCGAGCGGTCGAAGGCGGCTGACTTGAAATCAGCAGGGGCGCAAGTCTCC
AGGGGTTCGAATCCTCTGCCCTCCGCCA
Downstream region at tRNA end position 
gttcttcagt
Secondary structure (Cloverleaf model)
>WENV170979829	Ser	TGA
                   c      GCCA gttcttcagt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     T C T C C     A
      C G A        G      | | + | |     G
    G       G C C G       A G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     AGGGGCGCAAGTCTCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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