The detailed information of tRNA gene sequence


Sequence ID>WENV170979831
Genome IDMTKZ01109911
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 711
End posion on genome 787
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttgcctcggg
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCGCATCGTTCGGGACGATGAGGTCCCGGGTTCAAA
TCCCGGCACCCCGACCA
Downstream region at tRNA end position 
tccgttgtcg
Secondary structure (Cloverleaf model)
>WENV170979831	Pro	CGG
                   g      ACCA tccgttgtcg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C G C G       C C G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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