The detailed information of tRNA gene sequence


Sequence ID>WENV170979835
Genome IDMTKZ01110180
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1105
End posion on genome 1011
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcttcgctct
tRNA gene sequence 
GGGGGCGTGGTGTAGTGGTCGAACATGCGGCCCTGTCAAGGCCGAGACCGCGGGTTCAAA
TCNNACCGCGGGTTCAAATCCCGTCGCTCCCGCTA
Downstream region at tRNA end position 
gaaaaagaaa
Secondary structure (Cloverleaf model)
>WENV170979835	Asp	GTC
                   t      GCTA gaaaaagaaa
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      C G A        G     AGACCGCGGGTTCAAATCNNACC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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