The detailed information of tRNA gene sequence


Sequence ID>WENV170979846
Genome IDMTKZ01110920
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 113
End posion on genome 202
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttttgcagc
tRNA gene sequence 
GGAGAAATGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGTCCGGGCAACCGGA
CCGGGGGTTCGAATCCCTCTTTCTCCGCAA
Downstream region at tRNA end position 
tcatctggaa
Secondary structure (Cloverleaf model)
>WENV170979846	Ser	TGA
                   c      GCAA tcatctggaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCCGGGCAACCGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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