The detailed information of tRNA gene sequence


Sequence ID>WENV170979857
Genome IDMTKZ01111749
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 604
End posion on genome 688
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
cggtaactgt
tRNA gene sequence 
GCCGGGGTGGTGGAATTGGTAGACACGCACGTTTGAGGGGCGTGTGGGGGAACCCGTACG
AGTTCGAGTCTCGTCCCCGGCACCA
Downstream region at tRNA end position 
tttaggtcgt
Secondary structure (Cloverleaf model)
>WENV170979857	Leu	GAG
                   t      ACCA tttaggtcgt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G C T C     A
      T A A        G      | | | | |     G
    T       G G T G       A C G A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGGGGAACCCGT
                    C - G
                    A - T
                    C - G
                    G - C
                    T + G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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