The detailed information of tRNA gene sequence


Sequence ID>WENV170979859
Genome IDMTKZ01111856
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 354
End posion on genome 263
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgtatattt
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGACGAATGGGGCCGCCTGCTAAGTGGTTGTCGGAGTAAAATCC
GACCCAGGGTTCGAATCCCTGCCTCTCCGCCT
Downstream region at tRNA end position 
cgtaaaaaaa
Secondary structure (Cloverleaf model)
>WENV170979859	Ser	GCT
                   t      GCCT cgtaaaaaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       C A G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTCGGAGTAAAATCCGACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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