The detailed information of tRNA gene sequence


Sequence ID>WENV170979861
Genome IDMTKZ01111942
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 734
End posion on genome 659
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgccttctgc
tRNA gene sequence 
GGGCCCATAGCTCAGCGGTTAGAGCGGCCGGCTCATAACCGGTTGGTCCCTGGTTCGAAT
CCAGGTGGGCCCACCC
Downstream region at tRNA end position 
gacctgccgc
Secondary structure (Cloverleaf model)
>WENV170979861	Met	CAT
                   c      ACCC gacctgccgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G A C C     A
      C G A        A      | | | | |     G
    G       C T C G       C C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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