The detailed information of tRNA gene sequence


Sequence ID>WENV170979862
Genome IDMTKZ01111992
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 569
End posion on genome 480
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaataatcc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTGAATGGAACAGTCTTGAAAACTGTCGTCCGTCTATGCGGA
CCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
attttcaaaa
Secondary structure (Cloverleaf model)
>WENV170979862	Ser	TGA
                   c      GCCA attttcaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G C G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        A     CGTCCGTCTATGCGGACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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