The detailed information of tRNA gene sequence


Sequence ID>WENV170979863
Genome IDMTKZ01112028
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 400
End posion on genome 475
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgcgccccgt
tRNA gene sequence 
GGGCCGCTAGCTCAGTCGGGAGAGCGCCGCCTTTGCACGGCGGAGGTCAGGGGTTCGACT
CCCCTGCGGTCCACCA
Downstream region at tRNA end position 
ccgttttgca
Secondary structure (Cloverleaf model)
>WENV170979863	Ala	TGC
                   t      ACCA ccgttttgca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G          T C
                    T     T C C C C     A
      T G A        A      | | | | |     G
    C       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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