The detailed information of tRNA gene sequence


Sequence ID>WENV170979899
Genome IDMTKZ01113881
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1108
End posion on genome 1035
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaagctacaa
tRNA gene sequence 
GGACAATTAGCTCAGCTGGTTAGAGCACTACATTCACATTGTAGGGGTCAGTAGTTCGAA
TCTACTATTGTCCAtgc
Downstream region at tRNA end position 
tttttataag
Secondary structure (Cloverleaf model)
>WENV170979899	Val	CAC
                   a      Atgc tttttataag
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     A - T
                     T - A          T A
                    T     T C A T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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