The detailed information of tRNA gene sequence


Sequence ID>WENV170979903
Genome IDMTKZ01114127
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5179
End posion on genome 5254
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gccgaggtcg
tRNA gene sequence 
GGGTTGGTAGCTCAGTCGGTAGAGCAGCGGCCTTTTAAGCCGTTGGTCCTGGGTTCGAGT
CCCAGCCAACCCACCA
Downstream region at tRNA end position 
cttcaaaacc
Secondary structure (Cloverleaf model)
>WENV170979903	Lys	TTT
                   g      ACCA cttcaaaacc
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     G - C          T G
                    T     G A C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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