The detailed information of tRNA gene sequence


Sequence ID>WENV170979905
Genome IDMTKZ01114460
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1004
End posion on genome 913
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaataatttc
tRNA gene sequence 
TGGATGAGGATGGGGTCCGGTGGCCCCCGCGGTCTTCAAAACCGTAGGCTGTAATTTATT
GCAGCGGCAGGTTCGATTCCTGCCCCATCCGCatg
Downstream region at tRNA end position 
caacccatgt
Secondary structure (Cloverleaf model)
>WENV170979905	SeC(p)	TCA
                   c      Catg caacccatgt
                     T + G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     A   C
                     G - C          T T
                    G     C G T C C     A
      C T G        A      | | | | |     G
    C       G G G T       G C A G G     C
    G       | | |                   T T
    G       C C C C
      T G G        C     AGGCTGTAATTTATTGCAGCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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