The detailed information of tRNA gene sequence


Sequence ID>WENV170979926
Genome IDMTKZ01115287
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 312
End posion on genome 223
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatctgtttT
tRNA gene sequence 
GGAGTCGTATCGAAGTGGTCATAACGGGGCGCACTCGAAATGCGTTAGCCCTCCGGGGCT
CGAGGGTTCGAATCCCTCCGACTCCGTCA
Downstream region at tRNA end position 
aaataaaaga
Secondary structure (Cloverleaf model)
>WENV170979926	Ser	CGA
                   T      GTCA aaataaaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C T C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G A G G G     C
  T           | | +                 T T
  C         A C G G
    A T A          G     TAGCCCTCCGGGGCTC
                    G + T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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