The detailed information of tRNA gene sequence


Sequence ID>WENV170979929
Genome IDMTKZ01115479
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 722
End posion on genome 631
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taatataaca
tRNA gene sequence 
GGAGGTATCGCATAGCTGGCCCAGTGCGAGGGATTGCTAATCCCTTGAGCCTTCAAAAGC
TCACGTGGGTTCGAATCCCACTACCTCCGCAA
Downstream region at tRNA end position 
gatgcttttt
Secondary structure (Cloverleaf model)
>WENV170979929	Ser	GCT
                   a      GCAA gatgcttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C A C C C     A
    T C G A        C      | | | | |     G
  G         T A C G       G T G G G     C
  G         + | | |                 T T
  C         G T G C
    C C A          G     TGAGCCTTCAAAAGCTCAC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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