The detailed information of tRNA gene sequence


Sequence ID>WENV170979932
Genome IDMTKZ01115770
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1283
End posion on genome 1208
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnncacga
tRNA gene sequence 
AGGGGTGTAGCTCAACTGGTAGAGCAGCGGATTCCAAATCCGCAGGTTTCGGGTTCGAGT
CCCGCCGCCCCTGCCC
Downstream region at tRNA end position 
tcttcgatcc
Secondary structure (Cloverleaf model)
>WENV170979932	Trp	CCA
                   a      GCCC tcttcgatcc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C G C C C     A
      C A A        A        | | | |     G
    T       C T C G       T C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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