The detailed information of tRNA gene sequence


Sequence ID>WENV170979943
Genome IDMTKZ01116540
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1304
End posion on genome 1389
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
accattttaa
tRNA gene sequence 
GCCGAGGTAGTCTAGCTAGGTAAGGCGGTGGTCTCGAAAACCACTGGTGCTCGCCACCAC
AAGGGTTCAAATCCCTTCCTCGGCGCtt
Downstream region at tRNA end position 
tcctacaaga
Secondary structure (Cloverleaf model)
>WENV170979943	Ser	CGA
                   a      GCtt tcctacaaga
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | | | | |     A
    T       T C T G       A A G G G     C
    A       | | + |                 T T
    G       A G G C
      G T A        G     TGGTGCTCGCCACCAC
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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