The detailed information of tRNA gene sequence


Sequence ID>WENV170979951
Genome IDMTKZ01116784
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1299
End posion on genome 1225
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattaaatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGAAGCTCGTCGGGCTCATAACCCGAAGGTCATAGGTTCAAA
TCCTATCCCCGCTACtc
Downstream region at tRNA end position 
gcaaaatata
Secondary structure (Cloverleaf model)
>WENV170979951	Met	CAT
                   t      ACtc gcaaaatata
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       A T A G G     C
    T       | | | |                 T T
    G       G C T C
      G A A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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