The detailed information of tRNA gene sequence


Sequence ID>WENV170979958
Genome IDMTKZ01117538
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1179
End posion on genome 1254
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tcgcgctccc
tRNA gene sequence 
GGGCCGCTAGCTCAGTCGGTAGAGCAGGGGACTTTTAATCCCAAGGTCACAGGTTCGAAT
CCTGTGCGGCCCACCA
Downstream region at tRNA end position 
acccattgtc
Secondary structure (Cloverleaf model)
>WENV170979958	Lys	TTT
                   c      ACCA acccattgtc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G          T A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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