The detailed information of tRNA gene sequence


Sequence ID>WENV170979959
Genome IDMTKZ01117597
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 475
End posion on genome 402
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggaaccgcat
tRNA gene sequence 
AGGGGTGTAGCTCAATTGGCAGAGCAGCCGTCTCCAAAGCGGCAGGTTGGGGGTTCAACT
CCCTCCGCCCCTGCtg
Downstream region at tRNA end position 
gaacgagcgg
Secondary structure (Cloverleaf model)
>WENV170979959	Trp	CCA
                   t      GCtg gaacgagcgg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T C
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    C - G
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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