The detailed information of tRNA gene sequence


Sequence ID>WENV170979961
Genome IDMTKZ01117879
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 127
End posion on genome 202
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aggttcgttc
tRNA gene sequence 
GGGGCGGTAGCTCAGTTGGGAGAGCGCTGCGTTCGCAATGCAGAGGTCGAGGGTTCAACT
CCCTTCCGCTCCACTA
Downstream region at tRNA end position 
caaaacccct
Secondary structure (Cloverleaf model)
>WENV170979961	Ala	CGC
                   c      ACTA caaaacccct
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C          T C
                    T     T T C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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