The detailed information of tRNA gene sequence


Sequence ID>WENV170979962
Genome IDMTKZ01117927
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 838
End posion on genome 911
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
accctgtagc
tRNA gene sequence 
GGGTGCGTGGCTCAGATGGTTAGAGCGCACGGTTCACATCCGTGAGGTCACAGGTTCGAG
ACCTGTCGCGCCCAtga
Downstream region at tRNA end position 
aagcctcctg
Secondary structure (Cloverleaf model)
>WENV170979962	Val	CAC
                   c      Atga aagcctcctg
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     C - G
                     G - C          A G
                    T     T G T C C     A
      A G A        G      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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