The detailed information of tRNA gene sequence


Sequence ID>WENV170979963
Genome IDMTKZ01117957
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1230
End posion on genome 1319
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggcgccttt
tRNA gene sequence 
GGAGAGGTAGCGTAGTCTGGCCGAACGCGCACGCCTGGAGAGCGTGTTTACCGCAAGGTA
ACGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gagcaaagaa
Secondary structure (Cloverleaf model)
>WENV170979963	Ser	GGA
                   t      GCCA gagcaaagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C T G A        A      | | | | |     G
  T         T G C G       G C G G G     C
  G         | | | |                 T T
  G         A C G C
    C C G A        G     TTTACCGCAAGGTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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