The detailed information of tRNA gene sequence


Sequence ID>WENV170979969
Genome IDMTKZ01118148
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 224
End posion on genome 149
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gcgcgattca
tRNA gene sequence 
GGGGCATTAGCTCAGTTGGTAGAGCGACGGCTTTGCAAGCCGTAGGTCAGGGGTTCGAGC
CCCCTATGCTCCACCC
Downstream region at tRNA end position 
aaagtgcctt
Secondary structure (Cloverleaf model)
>WENV170979969	Ala	TGC
                   a      ACCC aaagtgcctt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A          C G
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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