The detailed information of tRNA gene sequence


Sequence ID>WENV170979974
Genome IDMTKZ01118918
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1266
End posion on genome 1354
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctcgcccac
tRNA gene sequence 
GGAGGATTCGCATAGCGGCCTAGTGCGCACGATTGGAAATCGTGTTGGGCTAAACACCCT
CAGGGGTTCAAATCCCCTATCCTCCGCCA
Downstream region at tRNA end position 
accggannnn
Secondary structure (Cloverleaf model)
>WENV170979974	Ser	GGA
                   c      GCCA accggannnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      C G A        C      | | | | |     A
    G       T A C G       A G G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGGGCTAAACACCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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