The detailed information of tRNA gene sequence


Sequence ID>WENV170979986
Genome IDMTKZ01119555
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 683
End posion on genome 595
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atccacttaT
tRNA gene sequence 
GTTTGTGTGTCCGAGAGGTTTATGGTGCTACCCTGCTAAGGTAGTGTGCGAGTGATTGCA
CCGAAGGTTCGAATCCTTCCACAAACGTtt
Downstream region at tRNA end position 
tgctctggta
Secondary structure (Cloverleaf model)
>WENV170979986	Ser	GCT
                   T      GTtt tgctctggta
                     G - C
                     T - A
                     T - A
                     T - A
                     G - C
                     T - A
                     G - C          T A
                    T     C T T C C     A
      A G A        G      | | | | |     G
    G       G C C T       G A A G G     C
    G       + | |                   T T
    T       T G G T
      T T A        G     TGTGCGAGTGATTGCACC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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