The detailed information of tRNA gene sequence


Sequence ID>WENV170980002
Genome IDMTKZ01120671
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 23312
End posion on genome 23237
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acctccacca
tRNA gene sequence 
GGCGGCGTAGCCAAGCGGCAAAGGCGAGGGACTGCAAATCCCTTATTCCCCGGTTCAAAT
CCGGGCGCCGCCTCCA
Downstream region at tRNA end position 
gaagggcgga
Secondary structure (Cloverleaf model)
>WENV170980002	Cys	GCA
                   a      TCCA gaagggcgga
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G G G C C     A
      C G A        A      | | | | |     A
    G       A C C G       C C C G G     C
    G         | | |                 T T
    C       A G G C
      A A          G     TATTC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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