The detailed information of tRNA gene sequence


Sequence ID>WENV170980010
Genome IDMTKZ01120781
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 53275
End posion on genome 53203
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tcgcgaggtg
tRNA gene sequence 
GGTCCCATCGTCTAGGGGTCGAGGATACCGGGCTCTCATCCCGGAGACAGGGGTTCAAAT
CCCCTTGGGACCAgag
Downstream region at tRNA end position 
tgaggggcgc
Secondary structure (Cloverleaf model)
>WENV170980010	Glu	CTC
                   g      Agag tgaggggcgc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
      G G A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | +                 T T
    T       G G A T
      C G A        A     AGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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