The detailed information of tRNA gene sequence


Sequence ID>WENV170980011
Genome IDMTKZ01120781
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 28170
End posion on genome 28085
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctctaccag
tRNA gene sequence 
GGAGGGATGGGTGAGCGGACGAAACCGCCGGTCTTGAAAACCGGTGAGCGAAAGCTCCGT
GGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
ggatcgcccc
Secondary structure (Cloverleaf model)
>WENV170980011	Ser	TGA
                   g      GCCA ggatcgcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G T G G G     C
    G         | | |                 T T
    A       A A C C
      C G A        G     TGAGCGAAAGCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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