The detailed information of tRNA gene sequence


Sequence ID>WENV170980015
Genome IDMTKZ01120979
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5491
End posion on genome 5403
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccatcctgtC
tRNA gene sequence 
GGAGGCGTGCCCGAGCGGCTGAAGGGACCGGTTTTGAAAACCGGCGTGCGGGAAACCGTA
CCGGGGGTTCGAATCCCTCCGCCTCCGTtc
Downstream region at tRNA end position 
tgcgtcgctc
Secondary structure (Cloverleaf model)
>WENV170980015	Ser	TGA
                   C      GTtc tgcgtcgctc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C C       G G G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        A     CGTGCGGGAAACCGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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