The detailed information of tRNA gene sequence


Sequence ID>WENV170980021
Genome IDMTKZ01121438
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 720
End posion on genome 793
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cgtctcagtt
tRNA gene sequence 
GTCCCCGTCGTCTAGGGGTCTAGGACACTGGGTTTTCATCCCAGCAACAGGGGTTCGAAT
CCCCTCGGGGATGCgt
Downstream region at tRNA end position 
gcagaaggga
Secondary structure (Cloverleaf model)
>WENV170980021	Glu	TTC
                   t      GCgt gcagaaggga
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        A     CAAC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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