The detailed information of tRNA gene sequence


Sequence ID>WENV170980025
Genome IDMTKZ01121543
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1491
End posion on genome 1417
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atttttcttt
tRNA gene sequence 
GCGCCAGTAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCAGGGGTTCGAC
TCCCTTCTGGCGTGCgt
Downstream region at tRNA end position 
ctctgcgaaa
Secondary structure (Cloverleaf model)
>WENV170980025	Arg	TCT
                   t      GCgt ctctgcgaaa
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T C
                    T     T T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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