The detailed information of tRNA gene sequence


Sequence ID>WENV170980030
Genome IDMTKZ01121733
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 322
End posion on genome 246
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
agcgatgatt
tRNA gene sequence 
CGGGGTGTGGCGCAGCCTGGTAGCGCACGCGTCTGGGGGGCGTGGGGTCGCAAGTTCAAA
TCTTGTCACCCCGACAA
Downstream region at tRNA end position 
aaaatcaaag
Secondary structure (Cloverleaf model)
>WENV170980030	Pro	GGG
                   t      ACAA aaaatcaaag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T T C     A
      C G A        G      + | | | |     A
    C       C G C G       G C A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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