The detailed information of tRNA gene sequence


Sequence ID>WENV170980034
Genome IDMTKZ01121860
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 708
End posion on genome 636
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacccgtccc
tRNA gene sequence 
GGGCCCGTAGCTCAGTGGTTAGAGCGGAGGACTCATAATCCTTTGGTCGGGGGTTCGAAT
CCCTCCGGGCCCAttg
Downstream region at tRNA end position 
ccccacgggt
Secondary structure (Cloverleaf model)
>WENV170980034	Met	CAT
                   c      Attg ccccacgggt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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