The detailed information of tRNA gene sequence


Sequence ID>WENV170980035
Genome IDMTKZ01121939
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1217
End posion on genome 1142
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tgaagtactt
tRNA gene sequence 
CAGGGCGTAGTTCAGTTGGAAGAACGCCAGGTTCGGGACTTGGAGGTCGTGAGTTCAACC
CTCACCGCCCTGACCA
Downstream region at tRNA end position 
atgggggatt
Secondary structure (Cloverleaf model)
>WENV170980035	Pro	CGG
                   t      ACCA atgggggatt
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          C C
                    T     C A C T C     A
      T G A        A      | | | | |     A
    T       C T T G       G T G A G     C
    G       | | | |                 T T
    G       G A A C
      A A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    G + T
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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