The detailed information of tRNA gene sequence


Sequence ID>WENV170980038
Genome IDMTKZ01122016
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2173
End posion on genome 2101
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccctcgaagc
tRNA gene sequence 
GGGGGCATAGCTCAGCGGGTAGAGCGCCAGCTTTGCAAGCTGGAAGTCGGGGGTTCGAAT
CCCCCTGCCTCCAgcc
Downstream region at tRNA end position 
ctcggcgcgg
Secondary structure (Cloverleaf model)
>WENV170980038	Ala	TGC
                   c      Agcc ctcggcgcgg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AAGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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