The detailed information of tRNA gene sequence


Sequence ID>WENV170980039
Genome IDMTKZ01122016
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2089
End posion on genome 2015
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccctcggcgc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCACACGCTTGATAAGCGTGGGGTCACTGGTTCGAG
CCCAGTCAGGCCCACgg
Downstream region at tRNA end position 
ctgcggcagg
Secondary structure (Cloverleaf model)
>WENV170980039	Ile	GAT
                   c      ACgg ctgcggcagg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          C G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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