The detailed information of tRNA gene sequence


Sequence ID>WENV170980041
Genome IDMTKZ01122033
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6359
End posion on genome 6284
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttttgatttc
tRNA gene sequence 
GGGCCGTTAGCTTAGTTGGTAGAGCGCTTCCATGGCATGGAAGAGGTCACCGGTTCGAGT
CCGGTACGGTCCACCA
Downstream region at tRNA end position 
tggagacccg
Secondary structure (Cloverleaf model)
>WENV170980041	Ala	GGC
                   c      ACCA tggagacccg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     T G G C C     A
      T G A        A      | | | | |     G
    T       T T C G       A C C G G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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