The detailed information of tRNA gene sequence


Sequence ID>WENV170980051
Genome IDMTKZ01122975
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 7442
End posion on genome 7367
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataacgtttT
tRNA gene sequence 
GGCGGCGTAGCTCAGATGGTTAGAGCGTGGGCTTCATAATCCCAAGGTCAGTGGTTCGAT
TCCACTCGCCGCTAGtc
Downstream region at tRNA end position 
gcgtctacgg
Secondary structure (Cloverleaf model)
>WENV170980051	Met	CAT
                   T      AGtc gcgtctacgg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     T C A C C     A
      A G A        A      | | | | |     G
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    C   T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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