The detailed information of tRNA gene sequence


Sequence ID>WENV170980058
Genome IDMTKZ01123195
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4090
End posion on genome 4178
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccgtcgcctT
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGCTGATCGGGCTGGTTTCGAAAACCAGTGTGCGAGCAATCGTA
CCGGGGGTTCGAATCCCCCCCTCTCCGTtc
Downstream region at tRNA end position 
tttttggatc
Secondary structure (Cloverleaf model)
>WENV170980058	Ser	CGA
                   T      GTtc tttttggatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G G G G G     C
    G       + | | |                 T T
    C       T C G G
      T G A        G     TGTGCGAGCAATCGTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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