The detailed information of tRNA gene sequence


Sequence ID>WENV170980067
Genome IDMTKZ01123401
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5222
End posion on genome 5307
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctgaggattt
tRNA gene sequence 
GGGGGGTTAGCTCAGTTTGGTAGAGCGCCTGAATGGCATTCAGGAGGNNCAGGAGGTCGG
GAGTTCGAACCTCCTACCCTCCACCA
Downstream region at tRNA end position 
aatcccggac
Secondary structure (Cloverleaf model)
>WENV170980067	Ala	GGC
                   t      ACCA aatcccggac
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     G - C
                     T - A          C A
                    T     T C C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G G G A G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGNNCAGGAGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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