The detailed information of tRNA gene sequence


Sequence ID>WENV170980071
Genome IDMTKZ01123681
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 271
End posion on genome 345
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cggctcatat
tRNA gene sequence 
GGCTCCGTCGTCTAACGGTTAGGACACCGCTCTTTCAAGGCGGCAATAGGAGTTCGACTC
TCCTCGGGGCTACCA
Downstream region at tRNA end position 
gagtatattt
Secondary structure (Cloverleaf model)
>WENV170980071	Glu	TTC
                   t      ACCA gagtatattt
                     G + T
                     G - C
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T C
                    T     T C C T C     A
      C A A        C      | | | | |     G
    G       T C T G       A G G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAT
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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