The detailed information of tRNA gene sequence


Sequence ID>WENV170980073
Genome IDMTKZ01123807
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1693
End posion on genome 1766
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtccctgtaa
tRNA gene sequence 
GGGCGTATAGCTCAGTTGGCTAGAGCGTACGGATCACACCCGTAAGGTCGCAGGTTCGAG
CCCTGCTACGCCCAgtg
Downstream region at tRNA end position 
gccgggtgtt
Secondary structure (Cloverleaf model)
>WENV170980073	Val	CAC
                   a      Agtg gccgggtgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     A - T          C G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  A       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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