The detailed information of tRNA gene sequence


Sequence ID>WENV170980078
Genome IDMTKZ01124114
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 747
End posion on genome 659
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tcccgatcgg
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGCAGACGCGCTGGACTCAAACTCCAGTGAGGCTCACACCTCG
TGCGGGTTCGACCCCCGCCTTCGGCACCA
Downstream region at tRNA end position 
tcgtccgctc
Secondary structure (Cloverleaf model)
>WENV170980078	Leu	CAA
                   g      ACCA tcgtccgctc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          C C
                    T     C G C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGAGGCTCACACCTCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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