The detailed information of tRNA gene sequence


Sequence ID>WENV170980083
Genome IDMTKZ01124239
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 35004
End posion on genome 35078
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
cggcatgatc
tRNA gene sequence 
GCGCCCGTAGCTCAACGGACCAGAGCATCGGCCTTCGGAGCCGAGGGTTGGGGGTTCAAG
TCCTCCCGGGCGCACac
Downstream region at tRNA end position 
cacttcgctt
Secondary structure (Cloverleaf model)
>WENV170980083	Arg	TCG
                   c      ACac cacttcgctt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C C T C C     A
      C A A        A      | | + | |     A
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      C C A        A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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