The detailed information of tRNA gene sequence


Sequence ID>WENV170980098
Genome IDMTKZ01124932
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 987
End posion on genome 899
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tgattttacc
tRNA gene sequence 
GCCAGCATAGCTCAGTCGGTAGAGCACGTCACTCGTAATGACGGGNNCTCGTAATGACGG
GGTCACCAGTTCGACTCTGGTTGCTGGCTaaa
Downstream region at tRNA end position 
gaaaacccct
Secondary structure (Cloverleaf model)
>WENV170980098	Thr	CGT
                   c      Taaa gaaaacccct
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     C - G
                     A - T          T C
                    T     T G G T C     A
      T G A        A      | | | | |     G
    C       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGNNCTCGTAATGACGGGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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