The detailed information of tRNA gene sequence


Sequence ID>WENV170980103
Genome IDMTKZ01125150
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 691
End posion on genome 764
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgatgcatgc
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTCACACGGCGGAGGTCAGGAGTTCGAA
TCTCCTCGAGCCCAttc
Downstream region at tRNA end position 
aggnnaatat
Secondary structure (Cloverleaf model)
>WENV170980103	Val	CAC
                   c      Attc aggnnaatat
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C C T C     A
      C G A        G      | | | | |     G
    T       T C T G       A G G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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