The detailed information of tRNA gene sequence


Sequence ID>WENV170980107
Genome IDMTKZ01125266
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 13976
End posion on genome 13901
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gacgcttaat
tRNA gene sequence 
AGGCCAGTAGCTCAAGTGGTAGAGTACCGGTCTCCAAAACCGGGTGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tactcgcccc
Secondary structure (Cloverleaf model)
>WENV170980107	Trp	CCA
                   t      GCCA tactcgcccc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      G A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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