The detailed information of tRNA gene sequence


Sequence ID>WENV170980108
Genome IDMTKZ01125288
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5706
End posion on genome 5780
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gaagttggca
tRNA gene sequence 
GCGCGCTTAGCTCAGTGGAAGAGCACTTCCTTCACACGGAAGGGGTCGCAGGTTCAAGTC
CTGCAGCGCGCACCA
Downstream region at tRNA end position 
tttgacgggc
Secondary structure (Cloverleaf model)
>WENV170980108	Val	CAC
                   a      ACCA tttgacgggc
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     C G T C C     A
        G A        A      | | | | |     A
      T     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        A A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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